r: a few changes to the build process
This commit is contained in:
parent
f6277c776c
commit
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GPG Key ID:
42F8B4E30B673606
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|
||||
-rw-r--r-- root/root usr/lib/R/library/spatial/ppdata/towns.dat
|
||||
drwxr-xr-x root/root usr/lib/R/library/splines/
|
||||
-rw-r--r-- root/root usr/lib/R/library/splines/DESCRIPTION
|
||||
-rw-r--r-- root/root usr/lib/R/library/splines/INDEX
|
||||
|
|
@ -1278,81 +645,6 @@ drwxr-xr-x root/root usr/lib/R/library/stats4/help/
|
|||
drwxr-xr-x root/root usr/lib/R/library/stats4/html/
|
||||
-rw-r--r-- root/root usr/lib/R/library/stats4/html/00Index.html
|
||||
-rw-r--r-- root/root usr/lib/R/library/stats4/html/R.css
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/CITATION
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/COPYRIGHTS
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/DESCRIPTION
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/INDEX
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/Meta/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/Rd.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/data.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/features.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/hsearch.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/links.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/nsInfo.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/package.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/Meta/vignette.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/NAMESPACE
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/R/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/R/survival
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/R/survival.rdb
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/R/survival.rdx
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/data/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/data/Rdata.rdb
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/data/Rdata.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/data/Rdata.rdx
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/doc/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/adjcurve.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/adjcurve.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/adjcurve.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/approximate.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/approximate.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/approximate.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/compete.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/compete.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/compete.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/concordance.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/concordance.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/concordance.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/discrim.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/discrim.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/discrim.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/index.html
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/multi.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/multi.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/other.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/other.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/population.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/population.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/population.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/splines.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/splines.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/splines.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/survival.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/survival.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/survival.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/tiedtimes.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/tiedtimes.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/tiedtimes.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/timedep.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/timedep.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/timedep.pdf
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/validate.R
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/validate.Rnw
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/doc/validate.pdf
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/help/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/help/AnIndex
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/help/aliases.rds
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/help/figures/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/help/figures/logo.png
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/help/paths.rds
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/help/survival.rdb
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/help/survival.rdx
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/html/
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/html/00Index.html
|
||||
-rw-r--r-- root/root usr/lib/R/library/survival/html/R.css
|
||||
drwxr-xr-x root/root usr/lib/R/library/survival/libs/
|
||||
-rwxr-xr-x root/root usr/lib/R/library/survival/libs/survival.so
|
||||
drwxr-xr-x root/root usr/lib/R/library/tcltk/
|
||||
-rw-r--r-- root/root usr/lib/R/library/tcltk/DESCRIPTION
|
||||
-rw-r--r-- root/root usr/lib/R/library/tcltk/INDEX
|
||||
|
|
@ -1516,7 +808,7 @@ drwxr-xr-x root/root usr/share/R/make/
|
|||
-rw-r--r-- root/root usr/share/R/make/vars.mk
|
||||
-rw-r--r-- root/root usr/share/R/make/winshlib.mk
|
||||
drwxr-xr-x root/root usr/share/R/sh/
|
||||
-rw-r--r-- root/root usr/share/R/sh/echo.sh
|
||||
-rwxr-xr-x root/root usr/share/R/sh/echo.sh
|
||||
drwxr-xr-x root/root usr/share/applications/
|
||||
-rw-r--r-- root/root usr/share/applications/r.desktop
|
||||
drwxr-xr-x root/root usr/share/man/
|
||||
|
|
|
|||
|
|
@ -1,11 +1,14 @@
|
|||
untrusted comment: verify with /etc/ports/contrib.pub
|
||||
RWSagIOpLGJF374+dbgD38FMxrgQ1lJgIQntQU3RqI04+cgW3tKb0y1SLKnFqK11kBXldJVm+BflFxAS8wbMaUcyUbhqloCT3AU=
|
||||
SHA256 (Pkgfile) = cac84e82c90a16aeb88bfd9c576452be26632e93380323c48c69b0816a721092
|
||||
SHA256 (.footprint) = 0c19dba114680e4654ddb67c7827365add2a2f23e840d04db655b33021daf385
|
||||
RWSagIOpLGJF39+Bc1P7HQaUqYnyquWW9fyjZTXo7x1/a4IYKq/unLJaSbKnOXUoHaLDZMbcbNtoTeaZBC1hSNoNylQ2osVFkwA=
|
||||
SHA256 (Pkgfile) = 6e7ca7dcaa9cdc9fe580a0ee7d2dd8e47505bd6220ae0a834ea94c14ec210181
|
||||
SHA256 (.footprint) = 665cccb2f203c0b448be4f31597184cdfa3a1062ce3ff85f2f1dbbf0f3a57ff4
|
||||
SHA256 (R-4.2.2.tar.gz) = 0ff62b42ec51afa5713caee7c4fde7a0c45940ba39bef8c5c9487fef0c953df5
|
||||
SHA256 (r.desktop) = 25b01ea93fa704884b65ba002d44d4e99725bd826997e8c73b6467df9f23c798
|
||||
SHA256 (r.png) = 1580d06a737951f4f3c903cbd514247d9071fc6868eb9c2de94bb999cc195cb1
|
||||
SHA256 (R.conf) = 01057f4dd3d0eca3e31090b2793ab17ed6648501513f6cfea36a0c609a55ac5e
|
||||
SHA256 (R-4.2.2-browser-pdf-prefs.patch) = 98ba658e6be56bafc5f831627894c4706406e2e8feb39f6a18e8b54b0ec62f2c
|
||||
SHA256 (R-4.2.2-isspace-without-readline.patch) = 9e2a9d728abfd0a4acc83ac8a287592435472336fd55bc5083fc0b1ac5f75448
|
||||
SHA256 (R-4.2.2-parallel-rmath-h-install.patch) = f406c35ec38d37ccce109492afc18e02ed8f5adb781af68628801fa40c3f1121
|
||||
SHA256 (R-3.4.1-parallel.patch) = 7d08b75592f9452b1f92bfe148f9d24fd19ba9163cd16ee2dac753f2c1a891be
|
||||
SHA256 (R-3.4.1-rmath-shared.patch) = 76a2d04b3a77884baa3cf84b25920f875e026b73c217c59b06aba2fae634f858
|
||||
SHA256 (R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch) = 5611b1c168ff338a4164302fc265be150700ebbca49a33b55973810fe5519b6e
|
||||
|
|
|
|||
60
r/Pkgfile
60
r/Pkgfile
|
|
@ -6,9 +6,11 @@
|
|||
|
||||
name=r
|
||||
version=4.2.2
|
||||
release=1
|
||||
release=2
|
||||
source=(https://cran.r-project.org/src/base/R-${version::1}/R-$version.tar.gz
|
||||
r.desktop r.png R.conf
|
||||
R-4.2.2-browser-pdf-prefs.patch
|
||||
R-4.2.2-isspace-without-readline.patch R-4.2.2-parallel-rmath-h-install.patch
|
||||
R-3.4.1-parallel.patch R-3.4.1-rmath-shared.patch
|
||||
R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch)
|
||||
|
||||
|
|
@ -19,22 +21,36 @@ build() {
|
|||
patch -Np1 -i $SRC/R-3.4.1-parallel.patch
|
||||
patch -Np1 -i $SRC/R-3.4.1-rmath-shared.patch
|
||||
patch -Np1 -i $SRC/R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch
|
||||
patch -Np1 -i $SRC/R-4.2.2-browser-pdf-prefs.patch
|
||||
patch -Np1 -i $SRC/R-4.2.2-isspace-without-readline.patch
|
||||
patch -Np1 -i $SRC/R-4.2.2-parallel-rmath-h-install.patch
|
||||
|
||||
# configuring R
|
||||
prt-get isinst tk && PKGMK_R+=" --with-x=yes" || PKGMK_R+=" --with-x=no"
|
||||
prt-get isinst lapack && PKGMK_R+=" --with-lapack LAPACK_LIBS=$(pkg-config --libs lapack)"
|
||||
prt-get isinst lapack && PKGMK_R+=" --with-lapack LAPACK_LIBS=$(pkgconf --libs lapack)"
|
||||
# this needs a properly working java environment!
|
||||
[[ -e $(whereis javac) ]] && PKGMK_R+=" --enable-java" || PKGMK_R+=" --disable-java"
|
||||
|
||||
# set the correct dir for texmf distribution
|
||||
sed -i 's|$(rsharedir)/texmf|${datarootdir}/texmf|' share/Makefile.in
|
||||
|
||||
sed -i -e '/R_LIBS_SITE=/s/^/#/g' etc/Renviron.in
|
||||
echo 'R_LIBS_SITE=${R_LIBS_SITE-'"'/usr/lib/R/library:/usr/share/R/library'"'}' >> etc/Renviron.in
|
||||
|
||||
export R_PDFVIEWER=/usr/bin/xdg-open
|
||||
export R_PRINTCMD=lpr
|
||||
export R_BROWSER=/usr/bin/xdg-open
|
||||
|
||||
unset R_HOME
|
||||
export ldpath="/usr/lib/R/lib"
|
||||
|
||||
# version 3.6.2 needs at least the addition to FCFLAGS
|
||||
export CFLAGS+=' -fPIC'
|
||||
export CPPFLAGS+=' -fPIC'
|
||||
export FCFLAGS+=' -fPIC'
|
||||
|
||||
CFLAGS+=" -ffat-lto-objects" \
|
||||
CXXFLAGS+=" -ffat-lto-objects" \
|
||||
./configure $PKGMK_R \
|
||||
--prefix=/usr \
|
||||
--libdir=/usr/lib \
|
||||
|
|
@ -44,32 +60,44 @@ build() {
|
|||
rincludedir=/usr/include/R/ \
|
||||
F77=gfortran \
|
||||
LIBnn=lib \
|
||||
BLAS_LIBS=$(pkg-config --libs blas) \
|
||||
PKG_CONFIG=/usr/bin/pkg-config \
|
||||
--with-blas \
|
||||
BLAS_LIBS=$(pkgconf --libs blas) \
|
||||
PKG_CONFIG=/usr/bin/pkgconf \
|
||||
--with-blas=openblas \
|
||||
--enable-BLAS-shlib \
|
||||
--enable-R-shlib \
|
||||
--enable-byte-compiled-packages \
|
||||
--disable-nls
|
||||
--enable-lto \
|
||||
--enable-R-profiling \
|
||||
--enable-memory-profiling \
|
||||
--with-cairo \
|
||||
--with-ICU \
|
||||
--with-jpeglib \
|
||||
--with-lapack \
|
||||
--with-libpng \
|
||||
--with-libtiff \
|
||||
--with-system-tre \
|
||||
--without-recommended-packages \
|
||||
--disable-nls | tee CONFIGURE.log
|
||||
cat CONFIGURE.log | grep -A30 'R is now' - > CAPABILITIES
|
||||
make
|
||||
|
||||
# make nmath library
|
||||
pushd src/nmath/standalone
|
||||
make shared
|
||||
popd
|
||||
make -C src/nmath/standalone shared
|
||||
|
||||
# install R to $PKG
|
||||
make DESTDIR=$PKG install
|
||||
# same for the nmath library
|
||||
pushd src/nmath/standalone
|
||||
make DESTDIR=$PKG install
|
||||
#popd
|
||||
make -C src/nmath/standalone DESTDIR=$PKG install
|
||||
|
||||
sed -i "s|$PKG ||" "$PKG/usr/bin/R"
|
||||
chmod +x $PKG/usr/lib/R/bin/*
|
||||
chmod +x $PKG/usr/share/R/sh/echo.sh
|
||||
#chmod -x $PKG/usr/lib/R/library/mgcv/CITATION
|
||||
|
||||
sed -i "s|$PKG ||" $PKG/usr/bin/R
|
||||
rm $PKG/usr/lib/R/bin/R
|
||||
cd $PKG/usr/lib/R/bin
|
||||
ln -s ../../../bin/R
|
||||
|
||||
cd $PKG/usr/lib/R
|
||||
ln -s ../../include/R include
|
||||
|
||||
install -Dm644 $SRC/r.desktop \
|
||||
$PKG/usr/share/applications/r.desktop
|
||||
install -Dm644 $SRC/r.png \
|
||||
|
|
|
|||
95
r/R-4.2.2-browser-pdf-prefs.patch
Normal file
95
r/R-4.2.2-browser-pdf-prefs.patch
Normal file
|
|
@ -0,0 +1,95 @@
|
|||
From 6e48ab8b5006f3fdd8ef08f3f86406a02eabdc80 Mon Sep 17 00:00:00 2001
|
||||
From: Michael Orlitzky <michael@orlitzky.com>
|
||||
Date: Mon, 12 Sep 2022 08:31:46 -0400
|
||||
Subject: [PATCH 1/3] m4/R.m4: prefer xdg-open for R_BROWSER and R_PDFVIEWER.
|
||||
|
||||
The xdg-open utility (if it is present) will launch the user's
|
||||
preferred browsr or PDF viewer when fed an HTML page or a PDF
|
||||
document, respectively. It therefore makes sense to prefer it over
|
||||
(for example) firefox, which may be installed but not the user's
|
||||
preferred browser.
|
||||
---
|
||||
m4/R.m4 | 4 ++--
|
||||
1 file changed, 2 insertions(+), 2 deletions(-)
|
||||
|
||||
diff --git a/m4/R.m4 b/m4/R.m4
|
||||
index bdcfbea..c5052e7 100644
|
||||
--- a/m4/R.m4
|
||||
+++ b/m4/R.m4
|
||||
@@ -237,7 +237,7 @@ fi])
|
||||
## xdg-open is the freedesktop.org interface to kfmclient/gnome-open
|
||||
AC_DEFUN([R_PROG_BROWSER],
|
||||
[if test -z "${R_BROWSER}"; then
|
||||
- AC_PATH_PROGS(R_BROWSER, [firefox mozilla galeon opera xdg-open kfmclient gnome-moz-remote open])
|
||||
+ AC_PATH_PROGS(R_BROWSER, [xdg-open firefox mozilla galeon opera kfmclient gnome-moz-remote open])
|
||||
fi
|
||||
if test -z "${R_BROWSER}"; then
|
||||
warn_browser="I could not determine a browser"
|
||||
@@ -255,7 +255,7 @@ AC_SUBST(R_BROWSER)
|
||||
## the FreeBSD acroread port.
|
||||
AC_DEFUN([R_PROG_PDFVIEWER],
|
||||
[AC_PATH_PROGS(R_PDFVIEWER,
|
||||
- [${R_PDFVIEWER} acroread acroread4 xdg-open evince xpdf gv gnome-gv ggv okular kpdf open gpdf kghostview])
|
||||
+ [${R_PDFVIEWER} xdg-open acroread acroread4 evince xpdf gv gnome-gv ggv okular kpdf open gpdf kghostview])
|
||||
if test -z "${R_PDFVIEWER}"; then
|
||||
warn_pdfviewer="I could not determine a PDF viewer"
|
||||
AC_MSG_WARN([${warn_pdfviewer}])
|
||||
--
|
||||
2.35.1
|
||||
|
||||
From 4e50ed9c976a4422a6d431d3d078164948f26bda Mon Sep 17 00:00:00 2001
|
||||
From: Michael Orlitzky <michael@orlitzky.com>
|
||||
Date: Mon, 12 Sep 2022 08:36:41 -0400
|
||||
Subject: [PATCH 2/3] m4/R.m4: add epiphany, lynx, and links to the R_BROWSER
|
||||
search list.
|
||||
|
||||
The epiphany browser is today one of the more popular ones, being the
|
||||
"official" GNOME browser. And lynx and links are nice text-based
|
||||
fallbacks.
|
||||
---
|
||||
m4/R.m4 | 2 +-
|
||||
1 file changed, 1 insertion(+), 1 deletion(-)
|
||||
|
||||
diff --git a/m4/R.m4 b/m4/R.m4
|
||||
index c5052e7..e99b0f9 100644
|
||||
--- a/m4/R.m4
|
||||
+++ b/m4/R.m4
|
||||
@@ -237,7 +237,7 @@ fi])
|
||||
## xdg-open is the freedesktop.org interface to kfmclient/gnome-open
|
||||
AC_DEFUN([R_PROG_BROWSER],
|
||||
[if test -z "${R_BROWSER}"; then
|
||||
- AC_PATH_PROGS(R_BROWSER, [xdg-open firefox mozilla galeon opera kfmclient gnome-moz-remote open])
|
||||
+ AC_PATH_PROGS(R_BROWSER, [xdg-open firefox mozilla epiphany galeon opera kfmclient gnome-moz-remote open lynx links])
|
||||
fi
|
||||
if test -z "${R_BROWSER}"; then
|
||||
warn_browser="I could not determine a browser"
|
||||
--
|
||||
2.35.1
|
||||
|
||||
From 719294ed2548f79ab6a5861662716d853284f4d7 Mon Sep 17 00:00:00 2001
|
||||
From: Michael Orlitzky <michael@orlitzky.com>
|
||||
Date: Mon, 12 Sep 2022 08:38:03 -0400
|
||||
Subject: [PATCH 3/3] m4/R.m4: add atril to the R_PDFVIEWER list.
|
||||
|
||||
Atril is the PDF viewer for the MATE desktop, essentially a fork of
|
||||
the gnome-2.x evince viewer.
|
||||
---
|
||||
m4/R.m4 | 2 +-
|
||||
1 file changed, 1 insertion(+), 1 deletion(-)
|
||||
|
||||
diff --git a/m4/R.m4 b/m4/R.m4
|
||||
index e99b0f9..7e04ced 100644
|
||||
--- a/m4/R.m4
|
||||
+++ b/m4/R.m4
|
||||
@@ -255,7 +255,7 @@ AC_SUBST(R_BROWSER)
|
||||
## the FreeBSD acroread port.
|
||||
AC_DEFUN([R_PROG_PDFVIEWER],
|
||||
[AC_PATH_PROGS(R_PDFVIEWER,
|
||||
- [${R_PDFVIEWER} xdg-open acroread acroread4 evince xpdf gv gnome-gv ggv okular kpdf open gpdf kghostview])
|
||||
+ [${R_PDFVIEWER} xdg-open acroread acroread4 evince atril xpdf gv gnome-gv ggv okular kpdf open gpdf kghostview])
|
||||
if test -z "${R_PDFVIEWER}"; then
|
||||
warn_pdfviewer="I could not determine a PDF viewer"
|
||||
AC_MSG_WARN([${warn_pdfviewer}])
|
||||
--
|
||||
2.35.1
|
||||
|
||||
22
r/R-4.2.2-isspace-without-readline.patch
Normal file
22
r/R-4.2.2-isspace-without-readline.patch
Normal file
|
|
@ -0,0 +1,22 @@
|
|||
From 6e36141598b78add7fb841480260b0a57ae79330 Mon Sep 17 00:00:00 2001
|
||||
From: smeyer <smeyer@00db46b3-68df-0310-9c12-caf00c1e9a41>
|
||||
Date: Wed, 26 Oct 2022 08:22:41 +0000
|
||||
Subject: [PATCH] avoid implicit declaration of 'isspace' --without-readline
|
||||
|
||||
git-svn-id: https://svn.r-project.org/R/trunk@83178 00db46b3-68df-0310-9c12-caf00c1e9a41
|
||||
---
|
||||
src/unix/sys-std.c | 1 +
|
||||
1 file changed, 1 insertion(+)
|
||||
|
||||
diff --git a/src/unix/sys-std.c b/src/unix/sys-std.c
|
||||
index 7b93d63884a..f95ff0cf7b3 100644
|
||||
--- a/src/unix/sys-std.c
|
||||
+++ b/src/unix/sys-std.c
|
||||
@@ -1339,6 +1339,7 @@ Rstd_ShowFiles(int nfile, /* number of files */
|
||||
*/
|
||||
|
||||
|
||||
+#include <ctype.h> /* for isspace */
|
||||
|
||||
int attribute_hidden Rstd_ChooseFile(int _new, char *buf, int len)
|
||||
{
|
||||
23
r/R-4.2.2-parallel-rmath-h-install.patch
Normal file
23
r/R-4.2.2-parallel-rmath-h-install.patch
Normal file
|
|
@ -0,0 +1,23 @@
|
|||
From ee1428e77095e52a7396fa7b455f63b7c5b9495b Mon Sep 17 00:00:00 2001
|
||||
From: kalibera <kalibera@00db46b3-68df-0310-9c12-caf00c1e9a41>
|
||||
Date: Tue, 27 Dec 2022 11:21:33 +0000
|
||||
Subject: [PATCH] Declare dependency to ensure include dir exists (PR#17743).
|
||||
|
||||
git-svn-id: https://svn.r-project.org/R/trunk@83504 00db46b3-68df-0310-9c12-caf00c1e9a41
|
||||
---
|
||||
src/nmath/standalone/Makefile.in | 2 +-
|
||||
1 file changed, 1 insertion(+), 1 deletion(-)
|
||||
|
||||
diff --git a/src/nmath/standalone/Makefile.in b/src/nmath/standalone/Makefile.in
|
||||
index 68b45006155..946795a0439 100644
|
||||
--- a/src/nmath/standalone/Makefile.in
|
||||
+++ b/src/nmath/standalone/Makefile.in
|
||||
@@ -151,7 +151,7 @@ install-strip: installdirs install-header install-pc
|
||||
fi
|
||||
@!(test -f libRmath.a) || $(SHELL) $(top_srcdir)/tools/copy-if-change libRmath.a $(DESTDIR)$(libdir)/libRmath.a
|
||||
|
||||
-install-header:
|
||||
+install-header: installdirs
|
||||
@(cd ../../include; $(MAKE) Rmath.h)
|
||||
@WANT_R_FRAMEWORK_FALSE@ @$(SHELL) $(top_srcdir)/tools/copy-if-change ../../include/Rmath.h $(DESTDIR)$(includedir)/Rmath.h
|
||||
@WANT_R_FRAMEWORK_TRUE@ @$(SHELL) $(top_srcdir)/tools/copy-if-change ../../include/Rmath.h $(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/include/Rmath.h
|
||||
15
r/README.md
Normal file
15
r/README.md
Normal file
|
|
@ -0,0 +1,15 @@
|
|||
R
|
||||
=
|
||||
|
||||
## In case installing additional libraries fails
|
||||
|
||||
In my experience, for some reason, certain libraries try to link to an
|
||||
outdated version of certain other system libraries.
|
||||
|
||||
Consider rebuilding all libraries from within a running R session.
|
||||
|
||||
```
|
||||
$ r
|
||||
> update.packages(checkBuilt = TRUE, ask = FALSE)
|
||||
..
|
||||
```
|
||||
Loading…
Reference in New Issue
Block a user