129 lines
3.7 KiB
Plaintext
129 lines
3.7 KiB
Plaintext
# Description: R is a free software environment for statistical computing and graphics
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# URL: https://www.r-project.org/
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# Maintainer: Tim Biermann, tbier at posteo dot de
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# Depends on: libpcre2 openblas zstd
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# Optional: lapack openjdk8 texlive tk
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name=r
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version=4.3.3
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release=1
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source=(https://cran.r-project.org/src/base/R-${version::1}/R-$version.tar.gz
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r.desktop r.png R.conf
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R-3.4.1-parallel.patch
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R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch)
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build() {
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cd R-$version
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# override the upstream opinion that curl 8 has an incompatible API
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curlTest=$(grep -n "LIBCURL_VERSION_MAJOR > 7" configure | cut -d: -f1)
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sed -i "$((curlTest + 1))s/exit.1./exit(0)/" configure
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# https://gitweb.gentoo.org/repo/gentoo.git/tree/dev-lang/R/files
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patch -Np1 -i $SRC/R-3.4.1-parallel.patch
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patch -Np1 -i $SRC/R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch
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# configuring R
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prt-get isinst tk && PKGMK_R+=" --with-x=yes" || PKGMK_R+=" --with-x=no"
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prt-get isinst lapack && PKGMK_R+=" --with-lapack LAPACK_LIBS=$(pkgconf --libs lapack)"
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# this needs a properly working java environment!
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[[ -e $(whereis javac) ]] && PKGMK_R+=" --enable-java" || PKGMK_R+=" --disable-java"
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# set the correct dir for texmf distribution
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sed -i 's|$(rsharedir)/texmf|${datarootdir}/texmf|' share/Makefile.in
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sed -i -e '/R_LIBS_SITE=/s/^/#/g' etc/Renviron.in
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echo 'R_LIBS_SITE=${R_LIBS_SITE-'"'/usr/lib/R/library:/usr/share/R/library'"'}' >> etc/Renviron.in
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export R_PDFVIEWER=/usr/bin/xdg-open
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export R_PRINTCMD=lpr
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export R_BROWSER=/usr/bin/xdg-open
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unset R_HOME
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export ldpath="/usr/lib/R/lib"
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# version 3.6.2 needs at least the addition to FCFLAGS
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export CFLAGS+=' -fPIC'
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export CPPFLAGS+=' -fPIC'
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export FCFLAGS+=' -fPIC'
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CFLAGS+=" -ffat-lto-objects" \
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CXXFLAGS+=" -ffat-lto-objects" \
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./configure $PKGMK_R \
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--prefix=/usr \
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--libdir=/usr/lib \
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--sysconfdir=/etc/R \
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--datarootdir=/usr/share \
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rsharedir=/usr/share/R/ \
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rincludedir=/usr/include/R/ \
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F77=gfortran \
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LIBnn=lib \
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BLAS_LIBS=$(pkgconf --libs blas) \
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PKG_CONFIG=/usr/bin/pkgconf \
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--with-blas=openblas \
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--enable-BLAS-shlib \
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--enable-R-shlib \
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--enable-byte-compiled-packages \
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--enable-lto \
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--enable-R-profiling \
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--enable-memory-profiling \
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--with-cairo \
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--with-ICU \
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--with-jpeglib \
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--with-lapack \
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--with-libpng \
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--with-libtiff \
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--with-system-tre \
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--without-recommended-packages \
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--disable-nls | tee CONFIGURE.log
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cat CONFIGURE.log | grep -A30 'R is now' - > CAPABILITIES
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make
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make -C src/nmath/standalone shared
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make DESTDIR=$PKG install
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make -C src/nmath/standalone DESTDIR=$PKG install
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chmod +x $PKG/usr/lib/R/bin/*
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chmod +x $PKG/usr/share/R/sh/echo.sh
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#chmod -x $PKG/usr/lib/R/library/mgcv/CITATION
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sed -i "s|$PKG ||" $PKG/usr/bin/R
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rm $PKG/usr/lib/R/bin/R
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cd $PKG/usr/lib/R/bin
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ln -s ../../../bin/R
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cd $PKG/usr/lib/R
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ln -s ../../include/R include
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install -Dm644 $SRC/r.desktop \
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$PKG/usr/share/applications/r.desktop
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install -Dm644 $SRC/r.png \
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$PKG/usr/share/pixmaps/r.png
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install -Dm644 $SRC/R.conf \
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$PKG/etc/ld.so.conf.d/R.conf
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install -d $PKG/etc/R
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cd $PKG/usr/lib/R/etc
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for i in *; do
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mv -f $i $PKG/etc/R
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ln -s /etc/R/$i $i
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done
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#clean up
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find $PKG \(\
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-iname '*README*' -o \
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-iname '*COPYING*' -o \
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-iname '*AUTHORS*' -o \
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-iname '*THANKS*' -o \
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-iname '*NEWS*' -o \
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-iname '*LICENSE*' -o \
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-iname '*CHANGELOG*' -o \
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-iname '*LC_MESSAGES*' \
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\) -exec rm -r '{}' \+ || true
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## doh! don't remove INSTALL or you won't be able to install R packages
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#-iname '*INSTALL*' -o \
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## rstudio now depends on finding docs that R provides..
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#-iname 'doc' -o \
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}
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